Merge branch 'jk/ref-cache-non-repository-optim'

Merge branch 'jk/ref-cache-non-repository-optim'

The underlying machinery used by "ls-files -o" and other commands
have been taught not to create empty submodule ref cache for a
directory that is not a submodule.  This removes a ton of wasted
CPU cycles.

* jk/ref-cache-non-repository-optim:
  resolve_gitlink_ref: ignore non-repository paths
  clean: make is_git_repository a public function